nvidia-bionemo/bionemo-agent-toolkit

agent-skills via skills-sh

Upstream: github.com/nvidia-bionemo/bionemo-agent-toolkit
Version: 0.1.0

Source details

Revision: v0.1.0 tag
Hash: sha256-QZWvi4wzU5LcbWxeLtq67KSVPcBEPLo0TIGA/M9NEwQ=
Snapshot: data/agent-skills/github.com/nvidia-bionemo/bionemo-agent-toolkit.json · latest JSON

33 packages

boltz2-nim

0.1.0 · plugins/bionemo-agent-toolkit/skills/boltz2-nim

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.boltz2-nim

Install with home-manager

programs.claude-code.skills.boltz2-nim = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.boltz2-nim;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.boltz2-nim'

complexa-binder-design

0.1.0 · workflows/generative_protein_binder_design/complexa-binder-design

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-binder-design

Install with home-manager

programs.claude-code.skills.complexa-binder-design = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-binder-design;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-binder-design'

complexa-design

0.1.0 · plugins/bionemo-agent-toolkit/skills/complexa-design

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-design

Install with home-manager

programs.claude-code.skills.complexa-design = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-design;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-design'

complexa-evaluate-pdbs

0.1.0 · plugins/bionemo-agent-toolkit/skills/complexa-evaluate-pdbs

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-evaluate-pdbs

Install with home-manager

programs.claude-code.skills.complexa-evaluate-pdbs = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-evaluate-pdbs;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-evaluate-pdbs'

complexa-setup

0.1.0 · plugins/bionemo-agent-toolkit/skills/complexa-setup

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-setup

Install with home-manager

programs.claude-code.skills.complexa-setup = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-setup;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-setup'

complexa-slurm

0.1.0 · plugins/bionemo-agent-toolkit/skills/complexa-slurm

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-slurm

Install with home-manager

programs.claude-code.skills.complexa-slurm = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-slurm;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-slurm'

complexa-sweep

0.1.0 · plugins/bionemo-agent-toolkit/skills/complexa-sweep

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-sweep

Install with home-manager

programs.claude-code.skills.complexa-sweep = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-sweep;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-sweep'

complexa-target

0.1.0 · plugins/bionemo-agent-toolkit/skills/complexa-target

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-target

Install with home-manager

programs.claude-code.skills.complexa-target = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-target;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.complexa-target'

cuequivariance

0.1.0 · plugins/bionemo-agent-toolkit/skills/cuEquivariance

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.cuequivariance

Install with home-manager

programs.claude-code.skills.cuequivariance = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.cuequivariance;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.cuequivariance'

diffdock-nim

0.1.0 · plugins/bionemo-agent-toolkit/skills/diffdock-nim

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.diffdock-nim

Install with home-manager

programs.claude-code.skills.diffdock-nim = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.diffdock-nim;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.diffdock-nim'

drug-discovery-pipeline

0.1.0 · plugins/bionemo-agent-toolkit/skills/drug-discovery-pipeline

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.drug-discovery-pipeline

Install with home-manager

programs.claude-code.skills.drug-discovery-pipeline = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.drug-discovery-pipeline;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.drug-discovery-pipeline'

evo2-nim

0.1.0 · plugins/bionemo-agent-toolkit/skills/evo2-nim

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.evo2-nim

Install with home-manager

programs.claude-code.skills.evo2-nim = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.evo2-nim;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.evo2-nim'

generative_protein_binder_design

0.1.0 · workflows/generative_protein_binder_design

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.generative_protein_binder_design

Install with home-manager

programs.claude-code.skills.generative_protein_binder_design = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.generative_protein_binder_design;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.generative_protein_binder_design'

genmol-nim

0.1.0 · plugins/bionemo-agent-toolkit/skills/genmol-nim

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.genmol-nim

Install with home-manager

programs.claude-code.skills.genmol-nim = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.genmol-nim;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.genmol-nim'

genomics-workflow-acceleration

0.1.0 · plugins/bionemo-agent-toolkit/skills/genomics-workflow-acceleration

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.genomics-workflow-acceleration

Install with home-manager

programs.claude-code.skills.genomics-workflow-acceleration = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.genomics-workflow-acceleration;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.genomics-workflow-acceleration'

kermt-add-cmim-pretrain

0.1.0 · plugins/bionemo-agent-toolkit/skills/kermt-add-cmim-pretrain

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-add-cmim-pretrain

Install with home-manager

programs.claude-code.skills.kermt-add-cmim-pretrain = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-add-cmim-pretrain;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-add-cmim-pretrain'

kermt-continue-pretrain

0.1.0 · plugins/bionemo-agent-toolkit/skills/kermt-continue-pretrain

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-continue-pretrain

Install with home-manager

programs.claude-code.skills.kermt-continue-pretrain = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-continue-pretrain;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-continue-pretrain'

kermt-embed

0.1.0 · plugins/bionemo-agent-toolkit/skills/kermt-embed

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-embed

Install with home-manager

programs.claude-code.skills.kermt-embed = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-embed;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-embed'

kermt-finetune

0.1.0 · plugins/bionemo-agent-toolkit/skills/kermt-finetune

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-finetune

Install with home-manager

programs.claude-code.skills.kermt-finetune = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-finetune;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-finetune'

kermt-infer

0.1.0 · plugins/bionemo-agent-toolkit/skills/kermt-infer

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-infer

Install with home-manager

programs.claude-code.skills.kermt-infer = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-infer;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-infer'

kermt-monitor

0.1.0 · plugins/bionemo-agent-toolkit/skills/kermt-monitor

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-monitor

Install with home-manager

programs.claude-code.skills.kermt-monitor = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-monitor;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-monitor'

kermt-pretrain-scratch

0.1.0 · plugins/bionemo-agent-toolkit/skills/kermt-pretrain-scratch

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-pretrain-scratch

Install with home-manager

programs.claude-code.skills.kermt-pretrain-scratch = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-pretrain-scratch;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-pretrain-scratch'

kermt-setup

0.1.0 · plugins/bionemo-agent-toolkit/skills/kermt-setup

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-setup

Install with home-manager

programs.claude-code.skills.kermt-setup = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-setup;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.kermt-setup'

molmim-nim

0.1.0 · plugins/bionemo-agent-toolkit/skills/molmim-nim

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.molmim-nim

Install with home-manager

programs.claude-code.skills.molmim-nim = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.molmim-nim;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.molmim-nim'

msa-search-nim

0.1.0 · plugins/bionemo-agent-toolkit/skills/msa-search-nim

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.msa-search-nim

Install with home-manager

programs.claude-code.skills.msa-search-nim = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.msa-search-nim;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.msa-search-nim'

msa-structure-prediction-pipeline

0.1.0 · plugins/bionemo-agent-toolkit/skills/msa-structure-prediction-pipeline

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.msa-structure-prediction-pipeline

Install with home-manager

programs.claude-code.skills.msa-structure-prediction-pipeline = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.msa-structure-prediction-pipeline;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.msa-structure-prediction-pipeline'

nvmolkit

0.1.0 · plugins/bionemo-agent-toolkit/skills/nvMolKit

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.nvmolkit

Install with home-manager

programs.claude-code.skills.nvmolkit = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.nvmolkit;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.nvmolkit'

openfold2-nim

0.1.0 · plugins/bionemo-agent-toolkit/skills/openfold2-nim

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.openfold2-nim

Install with home-manager

programs.claude-code.skills.openfold2-nim = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.openfold2-nim;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.openfold2-nim'

openfold3-nim

0.1.0 · plugins/bionemo-agent-toolkit/skills/openfold3-nim

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.openfold3-nim

Install with home-manager

programs.claude-code.skills.openfold3-nim = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.openfold3-nim;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.openfold3-nim'

parabricks

0.1.0 · plugins/bionemo-agent-toolkit/skills/parabricks

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.parabricks

Install with home-manager

programs.claude-code.skills.parabricks = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.parabricks;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.parabricks'

protein-binder-design

0.1.0 · workflows/generative_protein_binder_design/protein-binder-design

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.protein-binder-design

Install with home-manager

programs.claude-code.skills.protein-binder-design = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.protein-binder-design;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.protein-binder-design'

proteinmpnn-nim

0.1.0 · plugins/bionemo-agent-toolkit/skills/proteinmpnn-nim

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.proteinmpnn-nim

Install with home-manager

programs.claude-code.skills.proteinmpnn-nim = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.proteinmpnn-nim;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.proteinmpnn-nim'

rfdiffusion-nim

0.1.0 · plugins/bionemo-agent-toolkit/skills/rfdiffusion-nim

pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.rfdiffusion-nim

Install with home-manager

programs.claude-code.skills.rfdiffusion-nim = pkgs.agent-skills.github.nvidia-bionemo.bionemo-agent-toolkit.rfdiffusion-nim;

Build without the overlay

nix build 'github:sudosubin/agents.nix#agent-skills.aarch64-darwin.github.nvidia-bionemo.bionemo-agent-toolkit.rfdiffusion-nim'

The build command uses aarch64-darwin; aarch64-linux and x86_64-linux work too. Any agent that reads a skills directory can use these packages; see the usage guide for installation.